content stringlengths 22 815k | id int64 0 4.91M |
|---|---|
def temporal_filter(record_date_time, time_or_period, op):
"""
Helper function to perform temporal filters on feature set
:param record_date_time: datetime field value of a feature
:type record_date_time: :class:`datetime.datetime`
:param time_or_period: the time instant or time span to use as a fi... | 3,700 |
def fill_replay_buffer(env, replay_buffer: ReplayBuffer, desired_size: int):
""" Fill replay buffer with random transitions until size reaches desired_size. """
assert (
0 < desired_size and desired_size <= replay_buffer._replay_capacity
), f"It's not true that 0 < {desired_size} <= {replay_buffer._... | 3,701 |
def configure_logging():
"""
Configure logging for pandoc subprocess.
This is for use when passing Python filter modules to pandoc using
the --filter option.
"""
format_string = ("%s: %%(name)s: [%%(levelname)s] %%(message)s" %
__name__)
logging.basicConfig(format=form... | 3,702 |
def package_conda_env(folder: Union[str, Path]) -> Path:
"""Creates a .rar file of the current conda environment for use in jobs.
For efficiency, existing tarred env are not updated.
Parameter
---------
folder: str/Path
folder where the environment must be dumped
Returns
-------
... | 3,703 |
def get_couchbase_superuser_password(manager, plaintext: bool = True) -> str:
"""Get Couchbase superuser's password from file (default to
``/etc/gluu/conf/couchbase_superuser_password``).
To change the location, simply pass ``GLUU_COUCHBASE_SUPERUSER_PASSWORD_FILE`` environment variable.
:params manag... | 3,704 |
def GetAvailableDialogs():
"""Returns available dialogs in a list"""
list_path = sys.path
found = 0
for i in range (0,len(list_path)):
if os.path.exists(list_path[i]+"/dialogs"):
found = 1
break
if found == 0:
print ("Could not find /dialogs directo... | 3,705 |
def convert_rgb2gray(image, convert_dic):
"""convert rgb image to grayscale
Parameters
----------
image: array
RGB image. Channel order should be RGB.
convert_dic: dict
dictionary key is str(rgb list), value is grayscale value
Returns
-------
image_gray: array
Grayscale im... | 3,706 |
def get_external_storage_path():
"""Returns the external storage path for the current app."""
return _external_storage_path | 3,707 |
def organize_stanford_data(path=None, clear_previous_afq=False):
"""
If necessary, downloads the Stanford HARDI dataset into DIPY directory and
creates a BIDS compliant file-system structure in AFQ data directory:
~/AFQ_data/
└── stanford_hardi
├── dataset_description.json
└── derivatives
... | 3,708 |
def make_and_print_table(datas):
"""
Generated a contamination table
columns are reference genomes, and rows are samples.
"""
sample_names = {}
header = ['sample_id']
with open(datas[0]) as data_file:
for line in data_file:
header.append(line.split()[0])
... | 3,709 |
def at_server_start():
"""
This is called every time the server starts up, regardless of
how it was shut down.
"""
# load data
from muddery.server.database.worlddata.worlddata import WorldData
WorldData.reload()
# reset settings
from muddery.server.utils.game_settings import GAME_SE... | 3,710 |
def test_elem_o004_elem_o004_v(mode, save_output, output_format):
"""
TEST :3.3.2 XML Representation of Element Declaration Schema
Components : Document with element with complexType
"""
assert_bindings(
schema="msData/element/elemO004.xsd",
instance="msData/element/elemO004.xml",
... | 3,711 |
def blur(old_img):
"""
:param old_img: a original image
:return: a blurred image
"""
blur_img = SimpleImage.blank(old_img.width, old_img.height)
for x in range(old_img.width):
for y in range(old_img.height):
if x == 0 and y == 0: # Upper left cor... | 3,712 |
def main():
"""Main training program."""
# Disable CuDNN.
torch.backends.cudnn.enabled = False
# Timer.
timers = Timers()
# Arguments.
args = get_args()
# if args.load_huggingface:
# args.make_vocab_size_divisible_by = 1
# Pytorch distributed.
initialize_dist... | 3,713 |
def user_mysqrt():
"""Calculate mysqrt() of a number and compare to the math.sqrt()."""
# Show initial message
print("Program calculates square root of a given number using "
"Newton's guess method and compares it to the Python's "
"math.sqrt() function.")
# Take user's input
... | 3,714 |
def _log_validation_error(func_name, **kwargs):
"""
function responsible for handling the logging of the failed validations
:param func_name:
:param type:
:param kwargs:
:return:
"""
logged_string = f'{func_name} - failed to meet this value : {kwargs.get("validation_value")}'
if kwa... | 3,715 |
def print_sentence(sentence):
"""Displays words in terminal.
Param: sentence(list of str)
"""
for word in sentence:
print(word, end=" ")
# move to next line in terminal
print("") | 3,716 |
def generate_table_row(log_file, ancestry, official_only, code):
""" Takes an imported log and ancestry and converts it into a properly formatted pandas table.
Keyword arguments:
log_file -- output from import_log()
ancestry -- a single ancestry code
official_only -- a boolean indicating if all ... | 3,717 |
def read_preflib_file(filename, setsize=1, relative_setsize=None, use_weights=False):
"""Reads a single preflib file (soi, toi, soc or toc).
Parameters:
filename: str
Name of the preflib file.
setsize: int
Number of top-ranked candidates that voters approve.
... | 3,718 |
def get_row(client, instance, file_=None):
"""Get one row of a family table.
Args:
client (obj):
creopyson Client.
instance (str):
Instance name.
`file_` (str, optional):
File name. Defaults is currently active model.
Returns:
(dict):
... | 3,719 |
def callback_red(*args):
""" red slider event handler """
global red_int
col = "red"
str_val = str(r_slide_val.get())
red_int = code_shrtn(str_val, 20, 30, 60, 80, col)
update_display(red_int, green_int, blue_int) | 3,720 |
def expdb_exp(batch=False,batch_size=10):
"""
从exploit-db.com中提取CVE exp label，弥补不足
更新策略：增量覆盖
"""
create_table(db='exp2',table='expdb',key=['edb_id','cve_id','author','type','platform','date'],primary_key='edb_id')
so,exist_eid=cve_exists(db='exp2',table='expdb',key='edb_id')
all_eid=expdb_ex... | 3,721 |
def hospitalization_to_removed(clip_low=2, clip_high=32.6, mean=8.6, std=6.7):
"""
Returns the time for someone to either get removed after being
hospitalized in days within range(clip_low, clip_high),
of a truncated_norm(mean, std).
"""
return sample_truncated_norm(clip_low, clip_high, mean, st... | 3,722 |
def test_inheritance():
"""
test inheritance from different module
"""
# test module
test_data = doc.MatObject.matlabify('test_data')
test_submodule = test_data.getter('test_submodule')
sfdm = test_submodule.getter('super_from_diff_mod')
ok_(isinstance(sfdm, doc.MatClass))
e... | 3,723 |
def test_create():
"""
Test creating a row in the Project table.
"""
project = models.Project.create(DummyLoader())
# Check columns populated by ORM
assert project.id is not None
assert project.createdAt is not None
assert project.finished is None # None until project is done
asser... | 3,724 |
def split_mon_unmon(data, labels):
"""
Splits into monitored and unmonitored data
If a data point only happens once, we also consider it unmonitored
@return monitored_data, monitored_label, unmonitored_data
"""
from collections import Counter
occurence = Counter(labels)
monitored_data,... | 3,725 |
def test_template_filedates_now(setlocale):
"""Test {now}"""
autofile.plugins.templates.filedates.TODAY = None
template = FileTemplate(PHOTO_FILE)
rendered = template.render("{now}", options=RenderOptions())
assert rendered == ["2021-10-29T05:39:00.012345-07:00"]
rendered = template.render("{now... | 3,726 |
def test_profiles_manager_filter_method_empty():
""" Should filter if profile manager is None. """
mocked_api = MagicMock()
mocked_api.get.return_value = [{"a": "b"}, {"a": "c"}]
profiles = Profiles(api=mocked_api)
assert profiles.filter(a="b") == [Profile(mocked_api, {"a": "b"})] | 3,727 |
def supress_stdout(func):
"""Wrapper, makes a function non-verbose.
Args:
func: function to be silenced
"""
import contextlib
import os
def wrapper(*a, **ka):
with open(os.devnull, "w") as devnull:
with contextlib.redirect_stdout(devnull):
func(*a, *... | 3,728 |
def sum_and_count(x, y):
"""A function used for calculating the mean of a list from a reduce.
>>> from operator import truediv
>>> l = [15, 18, 2, 36, 12, 78, 5, 6, 9]
>>> truediv(*reduce(sum_and_count, l)) == 20.11111111111111
True
>>> truediv(*fpartial(sum_and_count)(l)) == 20.11111111111111... | 3,729 |
def animTempCustom():
"""
Temporarily play a custom animation for a set amount of time.
API should expect a full `desc` obect in json alongside a timelimit, in ms.
"""
colorList = request.form.get('colors').split(',')
colorsString = ""
for colorName in colorList:
c = Color(colorName... | 3,730 |
def datatype(self, dt):
"""Set data type of histogram variable.
Set data type of the variable represented by the histogram.
:param type dt: type of the variable represented by the histogram
:raises RunTimeError: if datatype has already been set, it will not overwritten
"""
if hasattr(self, "_d... | 3,731 |
def mock_stripe_invoice(monkeypatch):
"""Fixture to monkeypatch stripe.Invoice.* methods"""
mock = Mock()
monkeypatch.setattr(stripe, "Invoice", mock)
return mock | 3,732 |
def read_project(output_dir):
"""Read existing project data
"""
try:
yaml = YAML()
with open(project_yaml_file(output_dir), encoding='utf-8') as project:
project_data = yaml.load(project)
for key, value in project_data.items():
if value == None:
... | 3,733 |
def test_create_as_anonymous(default_client, weekly_business_post_data):
"""An anonymous user should not be able to create weekly_business."""
response = default_client.post(
_get_weekly_business_url(), weekly_business_post_data
)
assert response.status_code == status.HTTP_403_FORBIDDEN | 3,734 |
def process_data():
"""INPUT: chunk
OUTPUT: Dictionary of Tuples
"""
pass | 3,735 |
def test_bool():
"""Check bool(Property)."""
assert bool(Property('Name', '')) is False
assert bool(Property('Name', 'value')) is True
assert bool(Property('Name', [])) is False
assert bool(Property('Name', [
Property('Key', 'Value')
])) is True | 3,736 |
def bytes_to_int(byte_array: bytes) -> int:
""" Bytes to int """
return int.from_bytes(byte_array, byteorder='big') | 3,737 |
def ask(query, default=None):
"""Ask a question."""
if default:
default_q = ' [{0}]'.format(default)
else:
default_q = ''
inp = input("{query}{default_q}: ".format(query=query, default_q=default_q)).strip()
if inp or default is None:
return inp
else:
return defaul... | 3,738 |
def _clean_kwargs(keep_name=False, **kwargs):
"""
Sanatize the arguments for use with shade
"""
if "name" in kwargs and not keep_name:
kwargs["name_or_id"] = kwargs.pop("name")
return __utils__["args.clean_kwargs"](**kwargs) | 3,739 |
def transfer_file(user, source_endpoint, source_path,
dest_endpoint, dest_path, label):
"""
:param user: Must be a Django user with permissions to initiate the
transfer
:param source_endpoint: Source Endpoint UUID
:param source_path: Source path, including the filename
:param ... | 3,740 |
def calculate_pnl_per_equity(df_list):
"""Method that calculate the P&L of the strategy per equity and returns a list of P&L"""
pnl_per_equity = [] # initialize the list of P&L per equity
for df in df_list: # iterates over the dataframes of equities
pnl = df['Strategy Equity'].iloc[-1] - df['Buy and... | 3,741 |
def search(q_str: str) -> dict:
"""search in genius
Args:
q_str (str): query string
Returns:
dict: search response
"""
data = {'songs': [], 'lyric': []}
response = http.get(
'https://genius.com/api/search/multi?per_page=5', params={'q': q_str}, headers=headers).json()
... | 3,742 |
def build_shed_app(simple_kwargs):
"""Build a Galaxy app object from a simple keyword arguments.
Construct paste style complex dictionary. Also setup "global" reference
to sqlalchemy database context for tool shed database.
"""
log.info("Tool shed database connection: %s", simple_kwargs["database_c... | 3,743 |
def geocode(level=None, names=None, countries=None, states=None, counties=None, scope=None) -> NamesGeocoder:
"""
Create a `Geocoder`. Allows to refine ambiguous request with `where()` method,
scope that limits area of geocoding or with parents.
Parameters
----------
level : {'country', 'state'... | 3,744 |
def fpAbs(x):
"""
Returns the absolute value of the floating point `x`. So:
a = FPV(-3.2, FSORT_DOUBLE)
b = fpAbs(a)
b is FPV(3.2, FSORT_DOUBLE)
"""
return abs(x) | 3,745 |
def volumes(container:str) -> list:
"""
Return list of 'container' volumes (host,cont)
"""
buf = StringIO()
_exec(
docker, 'inspect', '-f', "'{{json .Mounts}}'", container, _out=buf
)
res = buf.getvalue().strip()
vols_list = json.loads(res[1:-1])
# vols = {d['Source']:d['D... | 3,746 |
def test_launch_lsf_orc(fileutils, wlmutils):
"""test single node orchestrator"""
exp_name = "test-launch-lsf-orc-batch"
exp = Experiment(exp_name, launcher="lsf")
test_dir = fileutils.make_test_dir(exp_name)
# batch = False to launch on existing allocation
network_interface = wlmutils.get_test... | 3,747 |
def names():
"""Return stock summary information"""
helper = SQLHelper()
conn = helper.getConnection()
repo = robinhoodRepository(conn)
stockInfo = repo.getAllStocks()
return json_response(stockInfo, 200) | 3,748 |
def test_delpay_payment_split(node_factory, bitcoind):
"""
Test behavior of delpay with an MPP
"""
MPP_TARGET_SIZE = 10**7 # Taken from libpluin-pay.c
amt = 5 * MPP_TARGET_SIZE
l1, l2, l3 = node_factory.line_graph(3, fundamount=10**5,
wait_for_announce=... | 3,749 |
def get_bot_group_config(bot_id):
"""Returns BotGroupConfig for a bot with given ID.
Returns:
BotGroupConfig or None if not found.
Raises:
BadConfigError if there's no cached config and the current config at HEAD is
not passing validation.
"""
cfg = _fetch_bot_groups()
gr = cfg.direct_matches... | 3,750 |
def add_utm(url_, campaign, source='notification', medium='email'):
"""Add the utm_* tracking parameters to a URL."""
return urlparams(
url_, utm_campaign=campaign, utm_source=source, utm_medium=medium) | 3,751 |
def check_job_token_attributes(token):
"""Check that the given JOB token contains all required attributes."""
attribs = ["limit", "remaining", "reset"]
for attr in attribs:
assert attr in token
assert int(token[attr]) >= 0 | 3,752 |
def is_forest(G):
"""Return True if the input graph is a forest
Parameters
----------
G : NetworkX Graph
An undirected graph.
Returns
-------
True if the input graph is a forest
Notes
-----
For undirected graphs only.
"""
for graph in nx.connected_component_subg... | 3,753 |
def package_to_pretty_string(package):
""" Given a PackageMetadata instance, returns a pretty string."""
template = "{0.name} {0.version}"
constraint_kinds = (
(ConstraintKinds.install_requires, package.install_requires),
(ConstraintKinds.conflicts, package.conflicts),
(ConstraintKin... | 3,754 |
def parse_uri(uri):
""" This implies that we are passed a uri that looks something like:
proto://username:password@hostname:port/database
In most cases, you can omit the port and database from the string:
proto://username:password@hostname
Also, in cases with no username, you c... | 3,755 |
def ITAparamsheet_itaparammatchinfo_data():
"""
ITAパラメータ抽出条件データ作成(正常系テスト用)
"""
module = import_module('web_app.models.ITA_models')
ItaParameterMatchInfo = getattr(module, 'ItaParameterMatchInfo')
ItaParameterMatchInfo(
match_id = 999,
ita_driver_id = 999,
menu_id = 999,... | 3,756 |
def pwgen(pw_len=16):
"""Generate a random password with the given length.
Allowed chars does not have "I" or "O" or letters and
digits that look similar -- just to avoid confusion.
"""
return get_random_string(
pw_len, 'abcdefghjkmnpqrstuvwxyz' 'ABCDEFGHJKLMNPQRSTUVWXYZ' '23456789'
) | 3,757 |
def absolute_path(secured_filename: str, curr_file: str = __file__) -> str:
"""
Prepend `secured_filename` with the current path.
Args:
secured_filename (str): Safe file name. Can be a sub path without the first '/'.
curr_file (str): File name of the module.
Returns:
str: Strin... | 3,758 |
def test_non_fourier_params_are_consistent():
"""
Check that StandardParams, StandardWithBiasParams and
ExtendedParams give the same rotation angles, given the same data"""
p1 = StandardParams.linear_ramp_from_hamiltonian(hamiltonian, 2, time=2)
p2 = ExtendedParams.linear_ramp_from_hamiltonian(hamil... | 3,759 |
def compute_tree_distances(tree):
"""
Computes the matrix of pairwise distances between leaves of the tree
"""
num_leaves = len(get_leaves(tree)) - 1
distances = np.zeros([num_leaves, num_leaves])
for leaf in range(num_leaves):
distance_dictionary, tmp = nx.multi_source_dijkstra(tree.to_... | 3,760 |
def create_rndm_backgr_selections(annotations, files, length, num, no_overlap=False, trim_table=False):
""" Create background selections of uniform length, randomly distributed across the
data set and not overlapping with any annotations, including those labelled 0.
The random sampling is performe... | 3,761 |
def to_BED(stats, manifest_or_array_type, save=True, filename='', genome_build=None, columns=None):
"""Converts & exports manifest and probe p-value dataframe to BED format.
- https://en.wikipedia.org/wiki/BED_(file_format)
- BED format: [ chromosome number | start position | end position | p-values]
Wh... | 3,762 |
def test_show_module(database_connection: mysql.connector.connect):
"""Run tests against show module"""
print("Testing wwdtm.show module")
# Start Time
start_time = time.perf_counter()
# Testing show.utility.id_exists
test_show.test_id_exists(1083, database_connection)
test_show.test_id_n... | 3,763 |
def GetPartition(partition_name, target_os):
"""Return the partition to install to.
Args:
partition_name: partition name from command-line
{'primary', 'secondary', 'other'}
target_os: 'fiberos' or 'android'
Returns:
0 or 1
Raises:
Fatal: if no partition could be determined... | 3,764 |
def sync_code_to_masters(cluster: Cluster, dcos_checkout_dir: Path) -> None:
"""
Sync files from a DC/OS checkout to master nodes.
This syncs integration test files and bootstrap files.
This is not covered by automated tests, and it is non-trivial.
In the following instructions, running a test mi... | 3,765 |
def extendHeader(files):
""" Add new draft keywords. """
for filename in files:
try:
print(filename)
#open file in update mode
f = pyf.open(filename, memmap=True, ignore_missing_end=True, mode='update')
#grab primary header
hdr = f[0].header
... | 3,766 |
async def call_dialogflow(message, config, lang=DEFAULT_LANGUAGE):
"""Call the Dialogflow api and return the response."""
async with aiohttp.ClientSession() as session:
payload = {
"v": DIALOGFLOW_API_VERSION,
"lang": lang,
"sessionId": message.connector.name,
... | 3,767 |
def gettgd(sat, eph, type=0):
""" get tgd: 0=E5a, 1=E5b """
sys = gn.sat2prn(sat)[0]
if sys == uGNSS.GLO:
return eph.dtaun * rCST.CLIGHT
else:
return eph.tgd[type] * rCST.CLIGHT | 3,768 |
def random_sign_uniform(shape,
minval=None,
maxval=None,
dtype=dtypes.float32,
seed=None):
"""Tensor with (possibly complex) random entries from a "sign Uniform".
Letting `Z` be a random variable equal to `-1` and `1` w... | 3,769 |
def ones_v(n):
"""
Return the column vector of ones of length n.
"""
return matrix(1, (n,1), 'd') | 3,770 |
def test_encrypt_and_decrypt_two(benchmark: BenchmarkFixture) -> None:
"""Benchmark encryption and decryption run together."""
primitives.decrypt = pysodium.crypto_aead_xchacha20poly1305_ietf_decrypt
primitives.encrypt = pysodium.crypto_aead_xchacha20poly1305_ietf_encrypt
def encrypt_and_decrypt() -> b... | 3,771 |
def truncate(fh, length):
"""Implementation of perl $fh->truncate method"""
global OS_ERROR, TRACEBACK, AUTODIE
try:
if hasattr(fh, 'truncate'):
fh.truncate(length)
else:
os.truncate(fh, length)
return True
except Exception as _e:
OS_ERRO... | 3,772 |
def get_fy_parent_nucl(fy_lib):
"""Gets the list of fission parents from a fission yield dictionnary.
Parameters
----------
fy_lib: dict
A fission yield dictionnary
"""
fy_nucl = get_fy_nucl(fy_lib)
fy_parent = []
sample_zamid = fy_nucl[0]
sample = fy_lib[sample_zamid]
... | 3,773 |
def block_input():
"""Block all user input unconditionally.
:command: `BlockInput
<https://www.autohotkey.com/docs/commands/BlockInput.htm>`_
"""
ahk_call("BlockInput", "On")
yield
ahk_call("BlockInput", "Off") | 3,774 |
def initialize ( is_test, no_cam ) :
"""job machine Tableをもとに個体、世代の初期設定"""
from functools import partial
jmTable = getJmTable ( is_test )
MAX_JOBS = jmTable.getJobsCount()
MAX_MACHINES = jmTable.getMachinesCount()
# makespan最小化
creator.create ( "FitnessMin", base.Fitness, weights=(-1.0,) )
# 個体はジョブ番号のリスト
#crea... | 3,775 |
def run():
"""Unleash payments in USA."""
(AddonExcludedRegion.objects
.exclude(addon__premium_type=amo.ADDON_FREE)
.filter(region=mkt.regions.US.id).delete()) | 3,776 |
def perform_variants_query(job, **kwargs):
"""Query for variants.
:param job: API to interact with the owner of the variants.
:type job: :class:`cibyl.sources.zuul.transactions.JobResponse`
:param kwargs: See :func:`handle_query`.
:return: List of retrieved variants.
:rtype: list[:class:`cibyl.... | 3,777 |
def get_model(share_weights=False, upsample=False): # pylint: disable=too-many-statements
""" Return a network dict for the model """
block0 = [{'conv1_1': [3, 64, 3, 1, 1]},
{'conv1_2': [64, 64, 3, 1, 1]}, {'pool1_stage1': [2, 2, 0]},
{'conv2_1': [64, 128, 3, 1, 1]},
... | 3,778 |
def bootstrap(config_uri, request=None, options=None):
""" Load a WSGI application from the PasteDeploy config file specified
by ``config_uri``. The environment will be configured as if it is
currently serving ``request``, leaving a natural environment in place
to write scripts that can generate URLs an... | 3,779 |
def add_subparser(
subparsers: SubParsersAction, parents: List[argparse.ArgumentParser]
) -> None:
"""Add all rasa x parsers.
Args:
subparsers: subparser we are going to attach to
parents: Parent parsers, needed to ensure tree structure in argparse
"""
x_parser_args = {
"par... | 3,780 |
def readSegy(filename) :
"""
Data,SegyHeader,SegyTraceHeaders=getSegyHeader(filename)
"""
printverbose("readSegy : Trying to read "+filename,0)
data = open(filename).read()
filesize=len(data)
SH=getSegyHeader(filename)
bps=getBytePerSample(SH)
ntraces = (filesize-3600)/(SH['ns']*bps+240)
# ntraces = 100... | 3,781 |
def chdir(request):
"""Reset CWD directory:
1. At start of test the CWD will be in the directory that
contains the test file.
2. After test completes the CWD will be reset to the CWD
before the test started.
"""
oldcwd = pathlib.Path.cwd()
request.fspath.dirpath()... | 3,782 |
def planar_transform(imgs, masks, pixel_coords_trg, k_s, k_t, rot, t, n_hat, a):
"""transforms imgs, masks and computes dmaps according to planar transform.
Args:
imgs: are L X [...] X C, typically RGB images per layer
masks: L X [...] X 1, indicating which layer pixels are valid
pixel_coords_trg: [...... | 3,783 |
def writeRLE(grid, rule):
"""
Writes grid out to a text file in RLE format
"""
if not os.path.exists("saved-RLEs"): os.mkdir("saved-RLEs")
filename = unique_file("saved-RLEs/RLEfile", "rle")
f = open(filename, "w")
top, bot, minCol, maxCol = findBoundaries(grid)
#write x,y header
f.w... | 3,784 |
def convertDynamicRenderStates(data, builder):
"""
Converts dynamic render states. The data map is expected to contain the following elements:
- lineWidth: float width for the line. Defaults to 1.
- depthBiasConstantFactor: float value for the depth bias constant factor. Defaults to 0.
- depthBiasClamp: float valu... | 3,785 |
def binary_search(a, search_value):
"""
@name binary_search
@param a array
"""
N = len(a)
l = 0
r = len(a) - 1
while(True):
try:
result = binary_search_iteration(a, l, r, search_value)
l, r = result
except TypeError:
return -1 if not re... | 3,786 |
def touch(filepath):
"""
Creates an empty file at filepath, if it does not already exist
"""
with open(filepath, 'a'):
pass | 3,787 |
def _key_match(d1: Dict[str, Any], d2: Dict[str, Any], key: str) -> bool:
"""
>>> _key_match({"a": 1}, {"a": 2}, "a")
False
>>> _key_match({"a": 1}, {"a": 2}, "b")
True
>>> _key_match({"a": 2}, {"a": 1}, "a")
False
>>> _key_match({"a": 1}, {"a": 1}, "a")
True
>>> _key_match({"a":... | 3,788 |
def calculate(over):
"""Returns the value of the first triangle number to have
over the specified number of divisors"""
triangle = 0
count = sum(range(triangle))
while True:
if num_divisors(count) > over:
answer = count
return answer
triangle += 1
coun... | 3,789 |
def convert_image_to_kernel(im: Image, oversampling, kernelwidth):
""" Convert an image to a griddata kernel
:param im: Image to be converted
:param oversampling: Oversampling of Image spatially
:param kernelwidth: Kernel width to be extracted
:return: numpy.ndarray[nchan, npol, oversampling, overs... | 3,790 |
def groupby(keys: Iterable, *arrays) -> Iterator[tuple]:
"""Generate unique keys with associated groups.
Args:
keys:
*arrays (Iterable):
"""
arrays = tuple(map(np.asarray, arrays))
try:
items = _arggroupby(asiarray(keys))
except TypeError: # fallback to sorting
... | 3,791 |
def prob(X, w):
"""
X: Nxd
w: dx1
---
prob: N x num_classes(2)"""
y = tf.constant(np.array([0.0, 1.0]), dtype=tf.float32)
prob = tf.exp(tf.matmul(X, w) * y) / (1 + tf.exp(tf.matmul(X, w)))
return prob | 3,792 |
def test_warped_vrt_dimensions(path_rgb_byte_tif):
"""
A WarpedVRT with target dimensions has the expected dataset
properties.
"""
with rasterio.open(path_rgb_byte_tif) as src:
extent = (-20037508.34, 20037508.34)
size = (2 ** 16) * 256
resolution = (extent[1] - extent[0]) / ... | 3,793 |
def get_similar_genes_Quantiles(
gene_expr: np.array,
n_genes: int,
candidate_quants: np.ndarray,
candidate_genes: np.array,
quantiles=(0.5, 0.75, 0.85, 0.9, 0.95, 0.97, 0.98, 0.99, 1),
):
"""Gets genes with a similar expression distribution as the inputted gene,
by measuring distance be... | 3,794 |
def get_date_strings():
"""
Get date strings for last month and this month in "%Y%m" format, e.g. "202201"
"""
today = date.today()
first = today.replace(day=1)
last_month = first - timedelta(days=1)
this_month_string = today.strftime("%Y%m")
last_month_string = last_month.strftime("%Y%... | 3,795 |
def get_gpa(cookie, sno, year='', term=''):
"""
获取已取得的总基点: 专必 公必 公选 专选
"""
logging.debug('Getting gpa: %s %s %s %s', sno, year, term, cookie)
url = 'http://uems.sysu.edu.cn/jwxt/xscjcxAction/xscjcxAction.action?method=getAllJd'
query_json = """
{
header: {
"code": -100,
... | 3,796 |
def get_status(conf):
"""
Find out in what state we are, ie. what steps have been done, etc
- are there unjudged terms? update with judgements from the file (if existings)
- if all terms are judged, we can proceed to the next step, so we set the new seed terms
"""
conn, domain, mode... | 3,797 |
def hosts_disable_all():
"""
status de host 0 = enabled
status de host 1 = disabled
"""
logger.info('Disabling all hosts, in blocks of 1000')
hosts = zapi.host.get(output=[ 'hostid' ], search={ 'status': 0 })
maxval = int(ceil(hosts.__len__())/1000+1)
bar = ProgressBar(maxval=maxval,widgets=[Percentage(... | 3,798 |
def run_vep_annotator(vep_data: str, vcf_path: str, out_path: str, fasta: str, vep_custom: Union[str,list]=None, overwrite: bool=False, vep_n_fork: int=4):
"""
Run variant ensembl predictor alone with custom options. See options details at
https://www.ensembl.org/info/docs/tools/vep/script/vep_options.html#... | 3,799 |
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